Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD47Q08722 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 PCDHA14-201ENST00000506751 2298 ntBASIC16.53■□□□□ 0.24
CD47Q08722 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CD47Q08722 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 CCR12P-201ENST00000446203 998 ntBASIC16.53■□□□□ 0.24
CD47Q08722 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.53■□□□□ 0.24
CD47Q08722 AL355075.4-201ENST00000554988 638 ntBASIC16.53■□□□□ 0.24
CD47Q08722 MIR3180-5-201ENST00000583743 153 ntBASIC16.53■□□□□ 0.24
CD47Q08722 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CD47Q08722 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CD47Q08722 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.53■□□□□ 0.24
CD47Q08722 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CD47Q08722 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.53■□□□□ 0.24
CD47Q08722 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.53■□□□□ 0.24
CD47Q08722 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.53■□□□□ 0.24
CD47Q08722 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD47Q08722 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.52■□□□□ 0.24
CD47Q08722 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.52■□□□□ 0.24
CD47Q08722 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.52■□□□□ 0.24
CD47Q08722 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 AC036111.1-201ENST00000533973 1582 ntBASIC16.52■□□□□ 0.24
CD47Q08722 AL162727.3-201ENST00000635661 2787 ntBASIC16.52■□□□□ 0.24
CD47Q08722 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.52■□□□□ 0.24
CD47Q08722 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD47Q08722 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CD47Q08722 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.52■□□□□ 0.24
CD47Q08722 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.52■□□□□ 0.24
CD47Q08722 SLC25A1P2-201ENST00000430693 912 ntBASIC16.52■□□□□ 0.24
CD47Q08722 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.52■□□□□ 0.24
CD47Q08722 FITM1-202ENST00000559294 800 ntBASIC16.52■□□□□ 0.24
CD47Q08722 C2orf69P3-201ENST00000565542 1120 ntBASIC16.52■□□□□ 0.24
CD47Q08722 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CD47Q08722 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD47Q08722 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CD47Q08722 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD47Q08722 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CD47Q08722 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.52■□□□□ 0.23
CD47Q08722 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD47Q08722 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.52■□□□□ 0.23
CD47Q08722 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.52■□□□□ 0.23
CD47Q08722 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.52■□□□□ 0.23
CD47Q08722 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD47Q08722 AC034236.2-201ENST00000606662 1610 ntBASIC16.52■□□□□ 0.23
CD47Q08722 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD47Q08722 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.23
CD47Q08722 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD47Q08722 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.51■□□□□ 0.23
CD47Q08722 TSPY17P-201ENST00000450329 467 ntBASIC16.51■□□□□ 0.23
CD47Q08722 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 MIR4674-201ENST00000582457 87 ntBASIC16.51■□□□□ 0.23
CD47Q08722 MIR4497-201ENST00000583208 89 ntBASIC16.51■□□□□ 0.23
CD47Q08722 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD47Q08722 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD47Q08722 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
CD47Q08722 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms