Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.88■□□□□ 0.29
SKP1P63208 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.88■□□□□ 0.29
SKP1P63208 AC099336.1-202ENST00000602961 463 ntBASIC16.88■□□□□ 0.29
SKP1P63208 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SKP1P63208 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.88■□□□□ 0.29
SKP1P63208 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.88■□□□□ 0.29
SKP1P63208 AC026471.1-201ENST00000564629 3026 ntBASIC16.88■□□□□ 0.29
SKP1P63208 KRT8P47-201ENST00000604727 1398 ntBASIC16.88■□□□□ 0.29
SKP1P63208 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SKP1P63208 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 FAM220CP-201ENST00000395253 831 ntBASIC16.87■□□□□ 0.29
SKP1P63208 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.87■□□□□ 0.29
SKP1P63208 AC096582.2-201ENST00000510860 516 ntBASIC16.87■□□□□ 0.29
SKP1P63208 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.87■□□□□ 0.29
SKP1P63208 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.87■□□□□ 0.29
SKP1P63208 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.87■□□□□ 0.29
SKP1P63208 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.87■□□□□ 0.29
SKP1P63208 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SKP1P63208 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SKP1P63208 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
SKP1P63208 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.86■□□□□ 0.29
SKP1P63208 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 KRT16P4-201ENST00000453883 522 ntBASIC16.86■□□□□ 0.29
SKP1P63208 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 AC005336.2-201ENST00000593183 939 ntBASIC16.86■□□□□ 0.29
SKP1P63208 AC114341.1-201ENST00000618070 349 ntBASIC16.86■□□□□ 0.29
SKP1P63208 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.86■□□□□ 0.29
SKP1P63208 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
SKP1P63208 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SKP1P63208 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SKP1P63208 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.85■□□□□ 0.29
SKP1P63208 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SKP1P63208 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SKP1P63208 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SKP1P63208 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms