Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRP54P61011 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SRP54P61011 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.52■□□□□ 0.39
SRP54P61011 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRP54P61011 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SRP54P61011 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.51■□□□□ 0.39
SRP54P61011 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SRP54P61011 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 AC135776.1-201ENST00000319817 2481 ntBASIC17.51■□□□□ 0.39
SRP54P61011 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 AL031284.1-201ENST00000419297 478 ntBASIC17.51■□□□□ 0.39
SRP54P61011 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.51■□□□□ 0.39
SRP54P61011 RNA5SP419-201ENST00000515908 135 ntBASIC17.51■□□□□ 0.39
SRP54P61011 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.51■□□□□ 0.39
SRP54P61011 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.51■□□□□ 0.39
SRP54P61011 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.51■□□□□ 0.39
SRP54P61011 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.51■□□□□ 0.39
SRP54P61011 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SRP54P61011 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 AL138781.2-201ENST00000617896 1843 ntBASIC17.51■□□□□ 0.39
SRP54P61011 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.51■□□□□ 0.39
SRP54P61011 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRP54P61011 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.51■□□□□ 0.39
SRP54P61011 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
SRP54P61011 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 AL590627.1-203ENST00000421194 1026 ntBASIC17.5■□□□□ 0.39
SRP54P61011 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.5■□□□□ 0.39
SRP54P61011 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRP54P61011 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.5■□□□□ 0.39
SRP54P61011 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SRP54P61011 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SRP54P61011 AC010460.3-201ENST00000511359 1579 ntBASIC17.49■□□□□ 0.39
SRP54P61011 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.49■□□□□ 0.39
SRP54P61011 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP54P61011 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SRP54P61011 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.49■□□□□ 0.39
SRP54P61011 AC018712.1-201ENST00000455767 687 ntBASIC17.49■□□□□ 0.39
SRP54P61011 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP54P61011 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 AC120114.3-201ENST00000611923 658 ntBASIC17.49■□□□□ 0.39
SRP54P61011 BX640515.1-201ENST00000617215 977 ntBASIC17.49■□□□□ 0.39
SRP54P61011 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SRP54P61011 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP54P61011 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SRP54P61011 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP54P61011 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP54P61011 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SRP54P61011 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP54P61011 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.48■□□□□ 0.39
SRP54P61011 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP54P61011 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms