Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN8P56748 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CLDN8P56748 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN8P56748 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN8P56748 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN8P56748 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.89■□□□□ 0.29
CLDN8P56748 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLDN8P56748 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 FAM8A6P-201ENST00000407496 1135 ntBASIC16.89■□□□□ 0.29
CLDN8P56748 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN8P56748 ATP5G1P1-201ENST00000448724 379 ntBASIC16.89■□□□□ 0.29
CLDN8P56748 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 AC093827.2-201ENST00000512654 315 ntBASIC16.89■□□□□ 0.29
CLDN8P56748 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN8P56748 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLDN8P56748 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN8P56748 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN8P56748 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN8P56748 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN8P56748 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 AC016396.2-201ENST00000562575 1417 ntBASIC16.88■□□□□ 0.29
CLDN8P56748 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLDN8P56748 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 IGHGP-201ENST00000390555 1178 ntBASIC16.88■□□□□ 0.29
CLDN8P56748 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 AC011558.1-201ENST00000623459 338 ntBASIC16.88■□□□□ 0.29
CLDN8P56748 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CLDN8P56748 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN8P56748 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CLDN8P56748 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN8P56748 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN8P56748 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN8P56748 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN8P56748 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN8P56748 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN8P56748 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN8P56748 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN8P56748 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN8P56748 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
CLDN8P56748 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms