Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP1S2P56377 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S2P56377 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.29■□□□□ 0.36
AP1S2P56377 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.29■□□□□ 0.36
AP1S2P56377 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.29■□□□□ 0.36
AP1S2P56377 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
AP1S2P56377 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 PCED1CP-201ENST00000419887 785 ntBASIC17.29■□□□□ 0.36
AP1S2P56377 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.29■□□□□ 0.36
AP1S2P56377 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.29■□□□□ 0.36
AP1S2P56377 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.29■□□□□ 0.36
AP1S2P56377 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.29■□□□□ 0.36
AP1S2P56377 AC011840.4-201ENST00000578471 627 ntBASIC17.29■□□□□ 0.36
AP1S2P56377 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
AP1S2P56377 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 REXO1L11P-201ENST00000620964 1927 ntBASIC17.29■□□□□ 0.36
AP1S2P56377 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP1S2P56377 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S2P56377 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
AP1S2P56377 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S2P56377 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S2P56377 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
AP1S2P56377 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 AC005104.2-201ENST00000427818 678 ntBASIC17.28■□□□□ 0.36
AP1S2P56377 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
AP1S2P56377 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S2P56377 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.28■□□□□ 0.36
AP1S2P56377 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.28■□□□□ 0.36
AP1S2P56377 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.28■□□□□ 0.36
AP1S2P56377 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S2P56377 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP1S2P56377 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S2P56377 AL138688.1-201ENST00000624851 1594 ntBASIC17.28■□□□□ 0.36
AP1S2P56377 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.27■□□□□ 0.36
AP1S2P56377 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP1S2P56377 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.27■□□□□ 0.36
AP1S2P56377 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms