Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH12P55289 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH12P55289 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDH12P55289 AC011676.5-201ENST00000624864 2660 ntBASIC16.57■□□□□ 0.24
CDH12P55289 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH12P55289 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH12P55289 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 LINC01568-207ENST00000641790 1380 ntBASIC16.57■□□□□ 0.24
CDH12P55289 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH12P55289 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH12P55289 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH12P55289 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH12P55289 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH12P55289 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH12P55289 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH12P55289 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH12P55289 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CDH12P55289 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
CDH12P55289 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.56■□□□□ 0.24
CDH12P55289 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH12P55289 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH12P55289 MIR3917-201ENST00000580971 93 ntBASIC16.56■□□□□ 0.24
CDH12P55289 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH12P55289 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CDH12P55289 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH12P55289 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH12P55289 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH12P55289 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH12P55289 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms