Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH6P55285 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH6P55285 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.49■□□□□ 0.55
CDH6P55285 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH6P55285 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 LINC00304-203ENST00000565008 1864 ntBASIC18.49■□□□□ 0.55
CDH6P55285 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 PP12613-201ENST00000424958 2230 ntBASIC18.49■□□□□ 0.55
CDH6P55285 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH6P55285 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH6P55285 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH6P55285 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDH6P55285 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDH6P55285 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CDH6P55285 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 LTB4R2-202ENST00000528054 3092 ntBASIC18.48■□□□□ 0.55
CDH6P55285 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDH6P55285 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH6P55285 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH6P55285 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH6P55285 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH6P55285 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH6P55285 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.48■□□□□ 0.55
CDH6P55285 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH6P55285 AL121956.5-201ENST00000625261 221 ntBASIC18.48■□□□□ 0.55
CDH6P55285 REXO1L11P-201ENST00000620964 1927 ntBASIC18.48■□□□□ 0.55
CDH6P55285 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDH6P55285 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDH6P55285 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH6P55285 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDH6P55285 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH6P55285 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 TSPY22P-201ENST00000427496 604 ntBASIC18.47■□□□□ 0.55
CDH6P55285 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH6P55285 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH6P55285 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH6P55285 AL136038.3-201ENST00000561909 1096 ntBASIC18.47■□□□□ 0.55
CDH6P55285 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDH6P55285 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH6P55285 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDH6P55285 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH6P55285 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms