Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.53■□□□□ 0.72
PMS1P54277 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.53■□□□□ 0.72
PMS1P54277 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.53■□□□□ 0.72
PMS1P54277 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PMS1P54277 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
PMS1P54277 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS1P54277 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.52■□□□□ 0.72
PMS1P54277 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS1P54277 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 AL671277.2-201ENST00000458060 996 ntBASIC19.52■□□□□ 0.72
PMS1P54277 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
PMS1P54277 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.52■□□□□ 0.72
PMS1P54277 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS1P54277 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.52■□□□□ 0.72
PMS1P54277 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS1P54277 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS1P54277 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.52■□□□□ 0.71
PMS1P54277 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PMS1P54277 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PMS1P54277 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PMS1P54277 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
PMS1P54277 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PMS1P54277 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.51■□□□□ 0.71
PMS1P54277 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 LYSMD4-203ENST00000378904 2122 ntBASIC19.51■□□□□ 0.71
PMS1P54277 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PMS1P54277 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.51■□□□□ 0.71
PMS1P54277 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.51■□□□□ 0.71
PMS1P54277 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 AC010460.3-201ENST00000511359 1579 ntBASIC19.51■□□□□ 0.71
PMS1P54277 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.51■□□□□ 0.71
PMS1P54277 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.51■□□□□ 0.71
PMS1P54277 AC099398.1-201ENST00000567919 2776 ntBASIC19.51■□□□□ 0.71
PMS1P54277 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.51■□□□□ 0.71
PMS1P54277 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PMS1P54277 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PMS1P54277 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS1P54277 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PMS1P54277 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PMS1P54277 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.5■□□□□ 0.71
PMS1P54277 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PMS1P54277 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PMS1P54277 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PMS1P54277 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PMS1P54277 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms