Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.46■□□□□ 0.71
ACLYP53396 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACLYP53396 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ACLYP53396 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ACLYP53396 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ACLYP53396 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 AC073130.3-201ENST00000624389 2278 ntBASIC19.45■□□□□ 0.7
ACLYP53396 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.45■□□□□ 0.7
ACLYP53396 AL035633.1-201ENST00000406139 838 ntBASIC19.45■□□□□ 0.7
ACLYP53396 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.45■□□□□ 0.7
ACLYP53396 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.45■□□□□ 0.7
ACLYP53396 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.45■□□□□ 0.7
ACLYP53396 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.45■□□□□ 0.7
ACLYP53396 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.45■□□□□ 0.7
ACLYP53396 AC004835.2-201ENST00000603762 682 ntBASIC19.45■□□□□ 0.7
ACLYP53396 AL513210.1-201ENST00000629608 234 ntBASIC19.45■□□□□ 0.7
ACLYP53396 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ACLYP53396 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.45■□□□□ 0.7
ACLYP53396 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ACLYP53396 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACLYP53396 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ACLYP53396 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ACLYP53396 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.44■□□□□ 0.7
ACLYP53396 LINC00982-205ENST00000420957 435 ntBASIC19.44■□□□□ 0.7
ACLYP53396 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.44■□□□□ 0.7
ACLYP53396 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.44■□□□□ 0.7
ACLYP53396 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 IGHV3-52-201ENST00000519770 353 ntBASIC19.44■□□□□ 0.7
ACLYP53396 AC004449.1-201ENST00000564240 433 ntBASIC19.44■□□□□ 0.7
ACLYP53396 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.44■□□□□ 0.7
ACLYP53396 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.44■□□□□ 0.7
ACLYP53396 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
ACLYP53396 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.44■□□□□ 0.7
ACLYP53396 AC092902.6-201ENST00000641783 218 ntBASIC19.44■□□□□ 0.7
ACLYP53396 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACLYP53396 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 AC009336.1-201ENST00000608941 1553 ntBASIC19.44■□□□□ 0.7
ACLYP53396 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.44■□□□□ 0.7
ACLYP53396 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.44■□□□□ 0.7
ACLYP53396 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.44■□□□□ 0.7
ACLYP53396 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.43■□□□□ 0.7
ACLYP53396 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.43■□□□□ 0.7
ACLYP53396 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.43■□□□□ 0.7
ACLYP53396 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.43■□□□□ 0.7
ACLYP53396 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.43■□□□□ 0.7
ACLYP53396 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ACLYP53396 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACLYP53396 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms