Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLCN4P51793 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CLCN4P51793 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN4P51793 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 CRYGEP-201ENST00000412192 528 ntBASIC18.61■□□□□ 0.57
CLCN4P51793 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN4P51793 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN4P51793 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN4P51793 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCN4P51793 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCN4P51793 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLCN4P51793 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN4P51793 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN4P51793 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN4P51793 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 NCF1C-201ENST00000438382 1427 ntBASIC18.6■□□□□ 0.57
CLCN4P51793 AC002310.6-201ENST00000624451 1377 ntBASIC18.6■□□□□ 0.57
CLCN4P51793 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCN4P51793 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCN4P51793 AC005829.1-201ENST00000570002 483 ntBASIC18.6■□□□□ 0.57
CLCN4P51793 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCN4P51793 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 AC073592.3-201ENST00000625118 1834 ntBASIC18.6■□□□□ 0.57
CLCN4P51793 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLCN4P51793 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN4P51793 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCN4P51793 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLCN4P51793 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN4P51793 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLCN4P51793 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN4P51793 AC108073.2-201ENST00000464002 357 ntBASIC18.59■□□□□ 0.57
CLCN4P51793 YBX1P5-201ENST00000509441 847 ntBASIC18.59■□□□□ 0.57
CLCN4P51793 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN4P51793 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CLCN4P51793 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN4P51793 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN4P51793 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLCN4P51793 WIZP1-201ENST00000531444 2299 ntBASIC18.59■□□□□ 0.57
CLCN4P51793 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLCN4P51793 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN4P51793 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN4P51793 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN4P51793 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN4P51793 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN4P51793 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN4P51793 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.58■□□□□ 0.57
CLCN4P51793 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN4P51793 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.58■□□□□ 0.57
CLCN4P51793 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN4P51793 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN4P51793 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.58■□□□□ 0.56
CLCN4P51793 KLF4P1-201ENST00000412782 1185 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms