Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC3P51654 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GPC3P51654 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC3P51654 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.59■□□□□ 0.73
GPC3P51654 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC3P51654 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC3P51654 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GPC3P51654 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.59■□□□□ 0.73
GPC3P51654 SCARNA2-201ENST00000458748 420 ntBASIC19.59■□□□□ 0.73
GPC3P51654 AC073648.2-201ENST00000510116 352 ntBASIC19.59■□□□□ 0.73
GPC3P51654 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.59■□□□□ 0.73
GPC3P51654 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.59■□□□□ 0.73
GPC3P51654 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC3P51654 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.59■□□□□ 0.73
GPC3P51654 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC3P51654 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC3P51654 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC3P51654 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC3P51654 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC3P51654 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GPC3P51654 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC3P51654 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC3P51654 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC3P51654 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GPC3P51654 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC3P51654 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC3P51654 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.58■□□□□ 0.72
GPC3P51654 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 SART3-203ENST00000546611 1184 ntBASIC19.58■□□□□ 0.72
GPC3P51654 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC3P51654 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.58■□□□□ 0.72
GPC3P51654 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 BX640515.1-201ENST00000617215 977 ntBASIC19.58■□□□□ 0.72
GPC3P51654 AP000867.4-201ENST00000641616 219 ntBASIC19.58■□□□□ 0.72
GPC3P51654 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 NOC2LP2-201ENST00000407594 1944 ntBASIC19.58■□□□□ 0.72
GPC3P51654 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC3P51654 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC3P51654 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC3P51654 BCL2-203ENST00000589955 5011 ntBASIC19.58■□□□□ 0.72
GPC3P51654 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GPC3P51654 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GPC3P51654 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.57■□□□□ 0.72
GPC3P51654 AL590627.1-203ENST00000421194 1026 ntBASIC19.57■□□□□ 0.72
GPC3P51654 SLC25A6P5-201ENST00000435663 894 ntBASIC19.57■□□□□ 0.72
GPC3P51654 HNRNPDP1-201ENST00000439535 754 ntBASIC19.57■□□□□ 0.72
GPC3P51654 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.57■□□□□ 0.72
GPC3P51654 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 AC120114.3-201ENST00000611923 658 ntBASIC19.57■□□□□ 0.72
GPC3P51654 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC3P51654 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC3P51654 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GPC3P51654 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC3P51654 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms