Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX2P50458 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX2P50458 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX2P50458 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.84■□□□□ 0.13
LHX2P50458 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LHX2P50458 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LHX2P50458 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX2P50458 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX2P50458 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LHX2P50458 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.84■□□□□ 0.13
LHX2P50458 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LHX2P50458 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LHX2P50458 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.83■□□□□ 0.13
LHX2P50458 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
LHX2P50458 AC020763.4-201ENST00000623414 4170 ntBASIC15.83■□□□□ 0.13
LHX2P50458 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.83■□□□□ 0.13
LHX2P50458 AC079776.2-201ENST00000641154 1609 ntBASIC15.83■□□□□ 0.13
LHX2P50458 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LHX2P50458 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LHX2P50458 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.83■□□□□ 0.13
LHX2P50458 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX2P50458 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX2P50458 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LHX2P50458 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX2P50458 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LHX2P50458 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
LHX2P50458 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX2P50458 NKAPP1-205ENST00000585790 367 ntBASIC15.83■□□□□ 0.12
LHX2P50458 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 AC073592.4-201ENST00000623827 446 ntBASIC15.83■□□□□ 0.12
LHX2P50458 AC148477.8-201ENST00000624298 468 ntBASIC15.83■□□□□ 0.12
LHX2P50458 AC073592.5-201ENST00000624854 528 ntBASIC15.83■□□□□ 0.12
LHX2P50458 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX2P50458 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX2P50458 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX2P50458 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
LHX2P50458 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.82■□□□□ 0.12
LHX2P50458 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX2P50458 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.82■□□□□ 0.12
LHX2P50458 AC021087.4-201ENST00000563761 564 ntBASIC15.82■□□□□ 0.12
LHX2P50458 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.82■□□□□ 0.12
LHX2P50458 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX2P50458 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX2P50458 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LHX2P50458 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX2P50458 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LHX2P50458 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX2P50458 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX2P50458 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX2P50458 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX2P50458 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms