Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK1P49759 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK1P49759 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK1P49759 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLK1P49759 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK1P49759 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK1P49759 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK1P49759 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK1P49759 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK1P49759 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK1P49759 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
CLK1P49759 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
CLK1P49759 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLK1P49759 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.72■□□□□ 0.27
CLK1P49759 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 AC093677.2-201ENST00000600169 1863 ntBASIC16.72■□□□□ 0.27
CLK1P49759 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK1P49759 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.72■□□□□ 0.27
CLK1P49759 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.72■□□□□ 0.27
CLK1P49759 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.72■□□□□ 0.27
CLK1P49759 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK1P49759 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 MYLKP1-201ENST00000509077 1580 ntBASIC16.72■□□□□ 0.27
CLK1P49759 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 REXO1L9P-201ENST00000604264 2108 ntBASIC16.72■□□□□ 0.27
CLK1P49759 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLK1P49759 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK1P49759 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLK1P49759 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
CLK1P49759 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 AC113347.1-201ENST00000413321 391 ntBASIC16.71■□□□□ 0.27
CLK1P49759 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.71■□□□□ 0.27
CLK1P49759 ATP5G1P1-201ENST00000448724 379 ntBASIC16.71■□□□□ 0.27
CLK1P49759 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.71■□□□□ 0.27
CLK1P49759 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK1P49759 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.71■□□□□ 0.27
CLK1P49759 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 AL138966.2-201ENST00000621997 464 ntBASIC16.71■□□□□ 0.27
CLK1P49759 AC141257.4-201ENST00000634557 245 ntBASIC16.71■□□□□ 0.27
CLK1P49759 AC136944.6-201ENST00000634818 245 ntBASIC16.71■□□□□ 0.27
CLK1P49759 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLK1P49759 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLK1P49759 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.71■□□□□ 0.27
CLK1P49759 AC008894.3-201ENST00000624324 3103 ntBASIC16.71■□□□□ 0.27
CLK1P49759 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK1P49759 AL499627.1-201ENST00000569373 2188 ntBASIC16.71■□□□□ 0.27
CLK1P49759 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLK1P49759 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.71■□□□□ 0.26
CLK1P49759 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK1P49759 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLK1P49759 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 NKILA-202ENST00000614771 2598 ntBASIC16.7■□□□□ 0.26
CLK1P49759 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLK1P49759 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.7■□□□□ 0.26
CLK1P49759 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK1P49759 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK1P49759 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.7■□□□□ 0.26
CLK1P49759 AL137013.1-201ENST00000432946 1228 ntBASIC16.7■□□□□ 0.26
CLK1P49759 AC009947.2-201ENST00000444014 672 ntBASIC16.7■□□□□ 0.26
CLK1P49759 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms