Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CEACAM3P40198 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CEACAM3P40198 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.5□□□□□ -0.09
CEACAM3P40198 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.5□□□□□ -0.09
CEACAM3P40198 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.5□□□□□ -0.09
CEACAM3P40198 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.5□□□□□ -0.09
CEACAM3P40198 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CEACAM3P40198 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.5□□□□□ -0.09
CEACAM3P40198 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.49□□□□□ -0.09
CEACAM3P40198 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 ATP5G2P1-201ENST00000433580 426 ntBASIC14.49□□□□□ -0.09
CEACAM3P40198 DRAXINP1-201ENST00000437611 948 ntBASIC14.49□□□□□ -0.09
CEACAM3P40198 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.49□□□□□ -0.09
CEACAM3P40198 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.49□□□□□ -0.09
CEACAM3P40198 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.49□□□□□ -0.09
CEACAM3P40198 AC092329.2-201ENST00000598402 547 ntBASIC14.49□□□□□ -0.09
CEACAM3P40198 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.49□□□□□ -0.09
CEACAM3P40198 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CEACAM3P40198 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms