Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT9P35527 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
KRT9P35527 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT9P35527 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT9P35527 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
KRT9P35527 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT9P35527 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT9P35527 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KRT9P35527 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT9P35527 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT9P35527 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
KRT9P35527 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT9P35527 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 LINC00167-201ENST00000530583 1419 ntBASIC19.45■□□□□ 0.7
KRT9P35527 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 BX664615.1-201ENST00000443558 458 ntBASIC19.45■□□□□ 0.7
KRT9P35527 AC034232.1-201ENST00000506026 1064 ntBASIC19.45■□□□□ 0.7
KRT9P35527 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT9P35527 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT9P35527 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT9P35527 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 NKILA-202ENST00000614771 2598 ntBASIC19.44■□□□□ 0.7
KRT9P35527 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT9P35527 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.44■□□□□ 0.7
KRT9P35527 AC005521.1-201ENST00000393351 872 ntBASIC19.44■□□□□ 0.7
KRT9P35527 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.44■□□□□ 0.7
KRT9P35527 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
KRT9P35527 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 AL157888.1-201ENST00000631930 593 ntBASIC19.44■□□□□ 0.7
KRT9P35527 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT9P35527 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT9P35527 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 AC011676.5-201ENST00000624864 2660 ntBASIC19.44■□□□□ 0.7
KRT9P35527 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT9P35527 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT9P35527 HLA-J-201ENST00000462773 1622 ntBASIC19.43■□□□□ 0.7
KRT9P35527 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT9P35527 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT9P35527 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT9P35527 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT9P35527 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.43■□□□□ 0.7
KRT9P35527 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT9P35527 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms