Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN7P35236 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 AC006011.2-201ENST00000621313 1158 ntBASIC18.36■□□□□ 0.53
PTPN7P35236 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN7P35236 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN7P35236 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN7P35236 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
PTPN7P35236 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN7P35236 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN7P35236 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN7P35236 AC097374.2-201ENST00000618617 1306 ntBASIC18.35■□□□□ 0.53
PTPN7P35236 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN7P35236 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN7P35236 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN7P35236 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN7P35236 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.35■□□□□ 0.53
PTPN7P35236 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PTPN7P35236 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN7P35236 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN7P35236 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN7P35236 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PTPN7P35236 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN7P35236 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
PTPN7P35236 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN7P35236 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN7P35236 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN7P35236 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PTPN7P35236 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 LINC01311-201ENST00000565162 1445 ntBASIC18.34■□□□□ 0.53
PTPN7P35236 LYSMD4-203ENST00000378904 2122 ntBASIC18.34■□□□□ 0.53
PTPN7P35236 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN7P35236 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PTPN7P35236 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN7P35236 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN7P35236 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 VENTXP5-201ENST00000523979 775 ntBASIC18.34■□□□□ 0.53
PTPN7P35236 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN7P35236 AC005332.3-201ENST00000589904 676 ntBASIC18.34■□□□□ 0.53
PTPN7P35236 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN7P35236 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN7P35236 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN7P35236 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN7P35236 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN7P35236 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms