Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LINC01451-201ENST00000623792 534 ntBASIC17.3■□□□□ 0.36
EPHA3P29320 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.3■□□□□ 0.36
EPHA3P29320 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
EPHA3P29320 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.3■□□□□ 0.36
EPHA3P29320 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.3■□□□□ 0.36
EPHA3P29320 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
EPHA3P29320 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.3■□□□□ 0.36
EPHA3P29320 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHA3P29320 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
EPHA3P29320 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
EPHA3P29320 UNC93B2-201ENST00000285383 730 ntBASIC17.29■□□□□ 0.36
EPHA3P29320 UBE2SP1-201ENST00000450587 669 ntBASIC17.29■□□□□ 0.36
EPHA3P29320 RBM17P1-201ENST00000453646 1190 ntBASIC17.29■□□□□ 0.36
EPHA3P29320 AC098590.1-201ENST00000468126 897 ntBASIC17.29■□□□□ 0.36
EPHA3P29320 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EPHA3P29320 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHA3P29320 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHA3P29320 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHA3P29320 AC024243.1-201ENST00000609234 778 ntBASIC17.29■□□□□ 0.36
EPHA3P29320 AC116562.4-202ENST00000641738 218 ntBASIC17.29■□□□□ 0.36
EPHA3P29320 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHA3P29320 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHA3P29320 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EPHA3P29320 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EPHA3P29320 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHA3P29320 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHA3P29320 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EPHA3P29320 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EPHA3P29320 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EPHA3P29320 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.28■□□□□ 0.36
EPHA3P29320 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 AL390955.1-201ENST00000428694 934 ntBASIC17.28■□□□□ 0.36
EPHA3P29320 AL158047.1-201ENST00000445918 881 ntBASIC17.28■□□□□ 0.36
EPHA3P29320 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.28■□□□□ 0.36
EPHA3P29320 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.28■□□□□ 0.36
EPHA3P29320 AC116407.2-201ENST00000613639 860 ntBASIC17.28■□□□□ 0.36
EPHA3P29320 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
EPHA3P29320 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHA3P29320 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EPHA3P29320 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHA3P29320 AC046158.3-201ENST00000624947 2558 ntBASIC17.28■□□□□ 0.36
EPHA3P29320 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
EPHA3P29320 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 AGGF1P2-201ENST00000426656 2106 ntBASIC17.27■□□□□ 0.36
EPHA3P29320 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHA3P29320 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHA3P29320 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
EPHA3P29320 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHA3P29320 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
EPHA3P29320 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
EPHA3P29320 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
EPHA3P29320 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.27■□□□□ 0.36
EPHA3P29320 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHA3P29320 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
EPHA3P29320 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHA3P29320 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms