Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN3P26045 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN3P26045 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 BX276092.7-203ENST00000637198 1536 ntBASIC18.11■□□□□ 0.49
PTPN3P26045 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN3P26045 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PTPN3P26045 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 AC139713.2-201ENST00000641328 2723 ntBASIC18.11■□□□□ 0.49
PTPN3P26045 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN3P26045 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PTPN3P26045 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPN3P26045 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN3P26045 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PTPN3P26045 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPN3P26045 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPN3P26045 IGHV3-41-201ENST00000613121 348 ntBASIC18.1■□□□□ 0.49
PTPN3P26045 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 HTR7P1-202ENST00000624664 4411 ntBASIC18.1■□□□□ 0.49
PTPN3P26045 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN3P26045 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN3P26045 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTPN3P26045 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN3P26045 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTPN3P26045 AC097374.2-201ENST00000618617 1306 ntBASIC18.09■□□□□ 0.49
PTPN3P26045 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 PCED1CP-201ENST00000419887 785 ntBASIC18.09■□□□□ 0.49
PTPN3P26045 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN3P26045 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PTPN3P26045 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PTPN3P26045 AC141586.5-201ENST00000624546 2050 ntBASIC18.09■□□□□ 0.49
PTPN3P26045 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN3P26045 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTPN3P26045 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN3P26045 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN3P26045 AC010460.3-201ENST00000511359 1579 ntBASIC18.08■□□□□ 0.49
PTPN3P26045 AL138688.1-201ENST00000624851 1594 ntBASIC18.08■□□□□ 0.49
PTPN3P26045 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.08■□□□□ 0.49
PTPN3P26045 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN3P26045 AL645608.8-201ENST00000606034 2086 ntBASIC18.08■□□□□ 0.49
PTPN3P26045 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PTPN3P26045 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN3P26045 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.08■□□□□ 0.49
PTPN3P26045 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN3P26045 AC016734.2-201ENST00000624325 1377 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms