Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 AL121894.2-201ENST00000602977 491 ntBASIC17.92■□□□□ 0.46
XPAP23025 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.92■□□□□ 0.46
XPAP23025 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.92■□□□□ 0.46
XPAP23025 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
XPAP23025 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
XPAP23025 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.92■□□□□ 0.46
XPAP23025 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
XPAP23025 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.91■□□□□ 0.46
XPAP23025 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
XPAP23025 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.91■□□□□ 0.46
XPAP23025 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.91■□□□□ 0.46
XPAP23025 RCN1P2-201ENST00000398357 915 ntBASIC17.91■□□□□ 0.46
XPAP23025 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 UNC93B7-201ENST00000509439 705 ntBASIC17.91■□□□□ 0.46
XPAP23025 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.91■□□□□ 0.46
XPAP23025 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.91■□□□□ 0.46
XPAP23025 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
XPAP23025 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
XPAP23025 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
XPAP23025 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XPAP23025 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.9■□□□□ 0.46
XPAP23025 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 ABALON-201ENST00000629058 1903 ntBASIC17.9■□□□□ 0.46
XPAP23025 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.9■□□□□ 0.46
XPAP23025 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
XPAP23025 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
XPAP23025 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
XPAP23025 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.9■□□□□ 0.46
XPAP23025 FAAHP1-202ENST00000446499 1238 ntBASIC17.9■□□□□ 0.46
XPAP23025 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.9■□□□□ 0.46
XPAP23025 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 KRT8P47-201ENST00000604727 1398 ntBASIC17.9■□□□□ 0.46
XPAP23025 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XPAP23025 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
XPAP23025 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
XPAP23025 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.89■□□□□ 0.46
XPAP23025 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
XPAP23025 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
XPAP23025 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
XPAP23025 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.89■□□□□ 0.45
XPAP23025 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 FLJ13224-201ENST00000313737 1514 ntBASIC17.89■□□□□ 0.45
XPAP23025 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 FAM220CP-201ENST00000395253 831 ntBASIC17.89■□□□□ 0.45
XPAP23025 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.89■□□□□ 0.45
XPAP23025 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.89■□□□□ 0.45
XPAP23025 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms