Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFP11831 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SRFP11831 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRFP11831 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.85■□□□□ 0.45
SRFP11831 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFP11831 BX276092.7-203ENST00000637198 1536 ntBASIC17.85■□□□□ 0.45
SRFP11831 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRFP11831 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.84■□□□□ 0.45
SRFP11831 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.84■□□□□ 0.45
SRFP11831 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.84■□□□□ 0.45
SRFP11831 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.84■□□□□ 0.45
SRFP11831 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.84■□□□□ 0.45
SRFP11831 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.84■□□□□ 0.45
SRFP11831 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SRFP11831 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.84■□□□□ 0.45
SRFP11831 AC069262.1-201ENST00000539058 672 ntBASIC17.84■□□□□ 0.45
SRFP11831 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRFP11831 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 AJ011932.1-201ENST00000621707 465 ntBASIC17.84■□□□□ 0.45
SRFP11831 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SRFP11831 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
SRFP11831 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRFP11831 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFP11831 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.83■□□□□ 0.45
SRFP11831 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFP11831 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SRFP11831 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFP11831 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRFP11831 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFP11831 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.83■□□□□ 0.45
SRFP11831 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SRFP11831 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRFP11831 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFP11831 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFP11831 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SRFP11831 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.83■□□□□ 0.44
SRFP11831 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SRFP11831 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFP11831 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.83■□□□□ 0.44
SRFP11831 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.83■□□□□ 0.44
SRFP11831 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
SRFP11831 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.83■□□□□ 0.44
SRFP11831 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.83■□□□□ 0.44
SRFP11831 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SRFP11831 AC006116.8-202ENST00000587620 1550 ntBASIC17.83■□□□□ 0.44
SRFP11831 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFP11831 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFP11831 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SRFP11831 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFP11831 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFP11831 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFP11831 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFP11831 PMS2P4-201ENST00000412466 1052 ntBASIC17.82■□□□□ 0.44
SRFP11831 FAM185BP-201ENST00000443595 716 ntBASIC17.82■□□□□ 0.44
SRFP11831 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFP11831 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFP11831 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFP11831 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFP11831 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFP11831 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 AC126763.1-201ENST00000552015 2118 ntBASIC17.82■□□□□ 0.44
SRFP11831 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFP11831 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.82■□□□□ 0.44
SRFP11831 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFP11831 AC009093.7-201ENST00000623853 1223 ntBASIC17.82■□□□□ 0.44
SRFP11831 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms