Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.23■□□□□ 0.67
CCDC172P0C7W6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 AL136038.4-201ENST00000603606 1261 ntBASIC19.23■□□□□ 0.67
CCDC172P0C7W6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 AL023973.1-201ENST00000624619 620 ntBASIC19.23■□□□□ 0.67
CCDC172P0C7W6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 AL355312.1-201ENST00000407115 2176 ntBASIC19.22■□□□□ 0.67
CCDC172P0C7W6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 KRT18P48-201ENST00000434763 852 ntBASIC19.22■□□□□ 0.67
CCDC172P0C7W6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.22■□□□□ 0.67
CCDC172P0C7W6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 AL391807.1-203ENST00000604392 2365 ntBASIC19.22■□□□□ 0.67
CCDC172P0C7W6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC172P0C7W6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 DDX43P3-201ENST00000441064 443 ntBASIC19.21■□□□□ 0.67
CCDC172P0C7W6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 LINC01451-201ENST00000623792 534 ntBASIC19.21■□□□□ 0.67
CCDC172P0C7W6 AL138688.1-201ENST00000624851 1594 ntBASIC19.21■□□□□ 0.67
CCDC172P0C7W6 AC066615.1-201ENST00000640911 628 ntBASIC19.21■□□□□ 0.67
CCDC172P0C7W6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.21■□□□□ 0.67
CCDC172P0C7W6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC172P0C7W6 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.2■□□□□ 0.66
CCDC172P0C7W6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 STARP1-201ENST00000397973 869 ntBASIC19.2■□□□□ 0.66
CCDC172P0C7W6 BX664615.1-201ENST00000443558 458 ntBASIC19.2■□□□□ 0.66
CCDC172P0C7W6 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms