Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL1P09341 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL1P09341 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CXCL1P09341 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CXCL1P09341 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CXCL1P09341 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 AC092384.3-202ENST00000564646 2873 ntBASIC13.8□□□□□ -0.2
CXCL1P09341 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CXCL1P09341 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL1P09341 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 AC004911.1-201ENST00000416316 871 ntBASIC13.8□□□□□ -0.2
CXCL1P09341 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL1P09341 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCL1P09341 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCL1P09341 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 AL050303.2-201ENST00000619798 666 ntBASIC13.8□□□□□ -0.2
CXCL1P09341 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CXCL1P09341 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CXCL1P09341 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL1P09341 AC005915.1-201ENST00000624912 2018 ntBASIC13.8□□□□□ -0.2
CXCL1P09341 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL1P09341 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL1P09341 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL1P09341 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL1P09341 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL1P09341 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL1P09341 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CXCL1P09341 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 TCAF2P1-201ENST00000291129 2421 ntBASIC13.79□□□□□ -0.2
CXCL1P09341 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL1P09341 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL1P09341 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CXCL1P09341 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL1P09341 AL357033.4-201ENST00000617703 1807 ntBASIC13.78□□□□□ -0.2
CXCL1P09341 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL1P09341 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL1P09341 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.78□□□□□ -0.2
CXCL1P09341 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL1P09341 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.78□□□□□ -0.2
CXCL1P09341 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms