Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL020996.1-203ENST00000536896 2307 ntBASIC19.57■□□□□ 0.72
MMP3P08254 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MMP3P08254 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP3P08254 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MMP3P08254 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 MCCD1P2-201ENST00000423228 335 ntBASIC19.56■□□□□ 0.72
MMP3P08254 VN2R19P-201ENST00000442399 1052 ntBASIC19.56■□□□□ 0.72
MMP3P08254 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 HCG4B-203ENST00000450128 991 ntBASIC19.56■□□□□ 0.72
MMP3P08254 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.56■□□□□ 0.72
MMP3P08254 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP3P08254 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.56■□□□□ 0.72
MMP3P08254 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP3P08254 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MMP3P08254 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MMP3P08254 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP3P08254 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.55■□□□□ 0.72
MMP3P08254 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 AC002558.1-201ENST00000488906 803 ntBASIC19.55■□□□□ 0.72
MMP3P08254 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 TNXA-203ENST00000507684 2038 ntBASIC19.55■□□□□ 0.72
MMP3P08254 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.55■□□□□ 0.72
MMP3P08254 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 AC004790.2-201ENST00000623588 572 ntBASIC19.55■□□□□ 0.72
MMP3P08254 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 AL805961.1-202ENST00000641562 540 ntBASIC19.55■□□□□ 0.72
MMP3P08254 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP3P08254 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
MMP3P08254 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP3P08254 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
MMP3P08254 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MMP3P08254 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP3P08254 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 AC097637.2-201ENST00000624096 1997 ntBASIC19.54■□□□□ 0.72
MMP3P08254 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP3P08254 AL138781.2-201ENST00000617896 1843 ntBASIC19.54■□□□□ 0.72
MMP3P08254 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MMP3P08254 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP3P08254 PRSS29P-201ENST00000440800 595 ntBASIC19.54■□□□□ 0.72
MMP3P08254 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP3P08254 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP3P08254 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP3P08254 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP3P08254 AC018845.2-201ENST00000568326 409 ntBASIC19.54■□□□□ 0.72
MMP3P08254 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
MMP3P08254 AC079781.4-201ENST00000641908 219 ntBASIC19.54■□□□□ 0.72
MMP3P08254 AC092865.6-201ENST00000642101 219 ntBASIC19.54■□□□□ 0.72
MMP3P08254 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 AC002310.6-201ENST00000624451 1377 ntBASIC19.54■□□□□ 0.72
MMP3P08254 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP3P08254 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms