Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.22■□□□□ 0.19
P04436 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.22■□□□□ 0.19
P04436 SCARNA2-201ENST00000458748 420 ntBASIC16.22■□□□□ 0.19
P04436 AC106795.1-205ENST00000512851 1056 ntBASIC16.22■□□□□ 0.19
P04436 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 AP002469.2-201ENST00000531724 424 ntBASIC16.22■□□□□ 0.19
P04436 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 AL662844.1-201ENST00000546340 181 ntBASIC16.22■□□□□ 0.19
P04436 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.22■□□□□ 0.19
P04436 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.22■□□□□ 0.19
P04436 AC104692.2-201ENST00000603054 253 ntBASIC16.22■□□□□ 0.19
P04436 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.22■□□□□ 0.19
P04436 AL355877.3-201ENST00000622820 899 ntBASIC16.22■□□□□ 0.19
P04436 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.22■□□□□ 0.19
P04436 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.22■□□□□ 0.19
P04436 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.22■□□□□ 0.19
P04436 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04436 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P04436 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
P04436 ABALON-201ENST00000629058 1903 ntBASIC16.21■□□□□ 0.19
P04436 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
P04436 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
P04436 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
P04436 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
P04436 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.21■□□□□ 0.19
P04436 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 COX5BP2-201ENST00000392354 334 ntBASIC16.21■□□□□ 0.19
P04436 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.21■□□□□ 0.19
P04436 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.21■□□□□ 0.19
P04436 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 AP001269.4-201ENST00000609611 512 ntBASIC16.21■□□□□ 0.19
P04436 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.21■□□□□ 0.19
P04436 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
P04436 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04436 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.21■□□□□ 0.19
P04436 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
P04436 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
P04436 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
P04436 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04436 AL020996.1-203ENST00000536896 2307 ntBASIC16.2■□□□□ 0.18
P04436 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 AP005117.1-201ENST00000584346 1413 ntBASIC16.2■□□□□ 0.18
P04436 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
P04436 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.2■□□□□ 0.18
P04436 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.2■□□□□ 0.18
P04436 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
P04436 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 DDX43P3-201ENST00000441064 443 ntBASIC16.2■□□□□ 0.18
P04436 FAM197Y8-203ENST00000450145 560 ntBASIC16.2■□□□□ 0.18
P04436 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.2■□□□□ 0.18
P04436 AC009078.2-202ENST00000463353 338 ntBASIC16.2■□□□□ 0.18
P04436 AF186996.4-201ENST00000467186 377 ntBASIC16.2■□□□□ 0.18
P04436 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.2■□□□□ 0.18
P04436 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.2■□□□□ 0.18
P04436 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.2■□□□□ 0.18
P04436 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
P04436 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.2■□□□□ 0.18
P04436 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.2■□□□□ 0.18
P04436 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.2■□□□□ 0.18
P04436 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms