Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC005915.1-201ENST00000624912 2018 ntBASIC14.95□□□□□ -0.02
CD74P04233 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.95□□□□□ -0.02
CD74P04233 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD74P04233 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.94□□□□□ -0.02
CD74P04233 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CD74P04233 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.94□□□□□ -0.02
CD74P04233 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD74P04233 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CD74P04233 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD74P04233 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.94□□□□□ -0.02
CD74P04233 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.94□□□□□ -0.02
CD74P04233 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CD74P04233 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.94□□□□□ -0.02
CD74P04233 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CD74P04233 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CD74P04233 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD74P04233 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CD74P04233 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CD74P04233 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CD74P04233 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CD74P04233 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.93□□□□□ -0.02
CD74P04233 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.93□□□□□ -0.02
CD74P04233 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.93□□□□□ -0.02
CD74P04233 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.93□□□□□ -0.02
CD74P04233 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.93□□□□□ -0.02
CD74P04233 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CD74P04233 AC008687.5-201ENST00000593746 558 ntBASIC14.93□□□□□ -0.02
CD74P04233 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.93□□□□□ -0.02
CD74P04233 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.93□□□□□ -0.02
CD74P04233 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.93□□□□□ -0.02
CD74P04233 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD74P04233 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD74P04233 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CD74P04233 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CD74P04233 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.92□□□□□ -0.02
CD74P04233 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.92□□□□□ -0.02
CD74P04233 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD74P04233 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD74P04233 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.92□□□□□ -0.02
CD74P04233 LYSMD4-203ENST00000378904 2122 ntBASIC14.92□□□□□ -0.02
CD74P04233 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.92□□□□□ -0.02
CD74P04233 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD74P04233 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.92□□□□□ -0.02
CD74P04233 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD74P04233 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms