Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SRP9-204ENST00000619790 377 ntTSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 HARS-201ENST00000307633 1780 ntTSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 PHGDH-209ENST00000641074 1780 ntBASIC10.97□□□□□ -0.65
APOBP04114 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
APOBP04114 LINC01225-203ENST00000563550 1244 ntBASIC10.97□□□□□ -0.65
APOBP04114 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.97□□□□□ -0.65
APOBP04114 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 AC107890.1-201ENST00000422478 521 ntBASIC10.97□□□□□ -0.65
APOBP04114 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.97□□□□□ -0.65
APOBP04114 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 ATP5G2P4-201ENST00000442175 420 ntBASIC10.97□□□□□ -0.65
APOBP04114 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.97□□□□□ -0.65
APOBP04114 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.96□□□□□ -0.65
APOBP04114 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
APOBP04114 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.65
APOBP04114 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC10.96□□□□□ -0.65
APOBP04114 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.96□□□□□ -0.65
APOBP04114 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 USP39-202ENST00000409025 1946 ntTSL 5 BASIC10.96□□□□□ -0.65
APOBP04114 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.96□□□□□ -0.65
APOBP04114 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 AC116407.2-201ENST00000613639 860 ntBASIC10.96□□□□□ -0.65
APOBP04114 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
APOBP04114 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOBP04114 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.96□□□□□ -0.65
APOBP04114 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.96□□□□□ -0.65
APOBP04114 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.96□□□□□ -0.65
APOBP04114 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.96□□□□□ -0.66
APOBP04114 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.96□□□□□ -0.66
APOBP04114 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.96□□□□□ -0.66
APOBP04114 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
APOBP04114 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 IGHV3-72-202ENST00000621503 303 ntBASIC10.96□□□□□ -0.66
APOBP04114 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC10.96□□□□□ -0.66
APOBP04114 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
APOBP04114 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.96□□□□□ -0.66
APOBP04114 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOBP04114 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
APOBP04114 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
APOBP04114 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
APOBP04114 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.95□□□□□ -0.66
APOBP04114 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
APOBP04114 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOBP04114 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.95□□□□□ -0.66
APOBP04114 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.95□□□□□ -0.66
APOBP04114 AC097493.3-201ENST00000509725 367 ntBASIC10.95□□□□□ -0.66
APOBP04114 AL596325.1-201ENST00000563991 1082 ntBASIC10.95□□□□□ -0.66
APOBP04114 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC10.95□□□□□ -0.66
APOBP04114 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms