Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA1P02708 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRNA1P02708 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRNA1P02708 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.23■□□□□ 0.67
CHRNA1P02708 REXO1L9P-201ENST00000604264 2108 ntBASIC19.23■□□□□ 0.67
CHRNA1P02708 AC004790.2-201ENST00000623588 572 ntBASIC19.23■□□□□ 0.67
CHRNA1P02708 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA1P02708 BX276092.7-203ENST00000637198 1536 ntBASIC19.23■□□□□ 0.67
CHRNA1P02708 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRNA1P02708 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHRNA1P02708 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.23■□□□□ 0.67
CHRNA1P02708 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHRNA1P02708 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA1P02708 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CHRNA1P02708 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
CHRNA1P02708 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 AC098818.2-201ENST00000564925 2320 ntBASIC19.22■□□□□ 0.67
CHRNA1P02708 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRNA1P02708 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHRNA1P02708 DDX43P3-201ENST00000441064 443 ntBASIC19.22■□□□□ 0.67
CHRNA1P02708 HCG4B-203ENST00000450128 991 ntBASIC19.22■□□□□ 0.67
CHRNA1P02708 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.22■□□□□ 0.67
CHRNA1P02708 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHRNA1P02708 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CHRNA1P02708 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA1P02708 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHRNA1P02708 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA1P02708 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA1P02708 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRNA1P02708 DNAJB3-202ENST00000449667 1266 ntBASIC19.21■□□□□ 0.67
CHRNA1P02708 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 STK19B-204ENST00000512515 211 ntBASIC19.21■□□□□ 0.67
CHRNA1P02708 AC018845.2-201ENST00000568326 409 ntBASIC19.21■□□□□ 0.67
CHRNA1P02708 MIR4751-201ENST00000578027 74 ntBASIC19.21■□□□□ 0.67
CHRNA1P02708 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA1P02708 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.21■□□□□ 0.67
CHRNA1P02708 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA1P02708 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA1P02708 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA1P02708 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 AL020996.1-203ENST00000536896 2307 ntBASIC19.2■□□□□ 0.66
CHRNA1P02708 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA1P02708 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHRNA1P02708 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA1P02708 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA1P02708 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
CHRNA1P02708 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA1P02708 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms