Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFP01375 AL353593.2-201ENST00000602529 1483 ntBASIC17.31■□□□□ 0.36
TNFP01375 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TNFP01375 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFP01375 MIR574-201ENST00000385209 96 ntBASIC17.31■□□□□ 0.36
TNFP01375 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFP01375 AL020989.1-201ENST00000422979 469 ntBASIC17.31■□□□□ 0.36
TNFP01375 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 PMS2P1-201ENST00000431037 1228 ntBASIC17.31■□□□□ 0.36
TNFP01375 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFP01375 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFP01375 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFP01375 AC008735.5-201ENST00000623544 497 ntBASIC17.31■□□□□ 0.36
TNFP01375 AC073592.4-201ENST00000623827 446 ntBASIC17.31■□□□□ 0.36
TNFP01375 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFP01375 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 AL049757.1-201ENST00000616842 1596 ntBASIC17.31■□□□□ 0.36
TNFP01375 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFP01375 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFP01375 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TNFP01375 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
TNFP01375 AC009949.1-201ENST00000623048 1830 ntBASIC17.31■□□□□ 0.36
TNFP01375 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 SIGLEC16-201ENST00000599858 1437 ntBASIC17.3■□□□□ 0.36
TNFP01375 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFP01375 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TNFP01375 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFP01375 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFP01375 AP000997.3-201ENST00000623333 2250 ntBASIC17.3■□□□□ 0.36
TNFP01375 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TNFP01375 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 SPDYE21P-201ENST00000413323 827 ntBASIC17.3■□□□□ 0.36
TNFP01375 LAGE3P1-201ENST00000425356 484 ntBASIC17.3■□□□□ 0.36
TNFP01375 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFP01375 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFP01375 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 AC105339.3-201ENST00000560043 636 ntBASIC17.3■□□□□ 0.36
TNFP01375 AC109462.3-201ENST00000573934 613 ntBASIC17.3■□□□□ 0.36
TNFP01375 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFP01375 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFP01375 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFP01375 AL020996.1-203ENST00000536896 2307 ntBASIC17.3■□□□□ 0.36
TNFP01375 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFP01375 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFP01375 IGHV3-52-201ENST00000519770 353 ntBASIC17.29■□□□□ 0.36
TNFP01375 KRT18P58-201ENST00000527480 1120 ntBASIC17.29■□□□□ 0.36
TNFP01375 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFP01375 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 AC012640.2-201ENST00000561606 901 ntBASIC17.29■□□□□ 0.36
TNFP01375 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.29■□□□□ 0.36
TNFP01375 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 FLJ13224-201ENST00000313737 1514 ntBASIC17.29■□□□□ 0.36
TNFP01375 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFP01375 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFP01375 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TNFP01375 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFP01375 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TNFP01375 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms