Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM3O75382 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM3O75382 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM3O75382 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM3O75382 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM3O75382 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM3O75382 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM3O75382 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM3O75382 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM3O75382 AP002414.4-201ENST00000589764 1148 ntBASIC16.58■□□□□ 0.24
TRIM3O75382 AC092329.2-201ENST00000598402 547 ntBASIC16.58■□□□□ 0.24
TRIM3O75382 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM3O75382 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM3O75382 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRIM3O75382 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM3O75382 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM3O75382 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM3O75382 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM3O75382 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
TRIM3O75382 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM3O75382 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM3O75382 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TRIM3O75382 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM3O75382 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM3O75382 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM3O75382 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRIM3O75382 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 KRT18P1-202ENST00000452408 1331 ntBASIC16.57■□□□□ 0.24
TRIM3O75382 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM3O75382 DRAXINP1-201ENST00000437611 948 ntBASIC16.57■□□□□ 0.24
TRIM3O75382 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM3O75382 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
TRIM3O75382 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM3O75382 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM3O75382 GMCL1P1-201ENST00000463439 1581 ntBASIC16.56■□□□□ 0.24
TRIM3O75382 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM3O75382 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRIM3O75382 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM3O75382 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM3O75382 RN7SL606P-201ENST00000472779 293 ntBASIC16.56■□□□□ 0.24
TRIM3O75382 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms