Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMARCA5O60264 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 AC125634.1-201ENST00000438758 1403 ntBASIC21.91■■□□□ 1.1
SMARCA5O60264 AC233702.3-201ENST00000578656 1387 ntBASIC21.91■■□□□ 1.1
SMARCA5O60264 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCA5O60264 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.91■■□□□ 1.1
SMARCA5O60264 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCA5O60264 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SMARCA5O60264 AC096633.1-201ENST00000422446 749 ntBASIC21.91■■□□□ 1.1
SMARCA5O60264 DDX43P3-201ENST00000441064 443 ntBASIC21.91■■□□□ 1.1
SMARCA5O60264 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.91■■□□□ 1.1
SMARCA5O60264 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.91■■□□□ 1.1
SMARCA5O60264 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCA5O60264 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCA5O60264 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCA5O60264 AC069148.1-201ENST00000608741 768 ntBASIC21.91■■□□□ 1.1
SMARCA5O60264 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.91■■□□□ 1.1
SMARCA5O60264 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.91■■□□□ 1.1
SMARCA5O60264 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCA5O60264 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCA5O60264 AC141586.5-201ENST00000624546 2050 ntBASIC21.91■■□□□ 1.1
SMARCA5O60264 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMARCA5O60264 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCA5O60264 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCA5O60264 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCA5O60264 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCA5O60264 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 AC007967.3-201ENST00000434308 558 ntBASIC21.9■■□□□ 1.1
SMARCA5O60264 LINC00265-3P-201ENST00000447588 903 ntBASIC21.9■■□□□ 1.1
SMARCA5O60264 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.9■■□□□ 1.1
SMARCA5O60264 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.9■■□□□ 1.1
SMARCA5O60264 AL138831.2-201ENST00000606564 490 ntBASIC21.9■■□□□ 1.1
SMARCA5O60264 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCA5O60264 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCA5O60264 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SMARCA5O60264 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SMARCA5O60264 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
SMARCA5O60264 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.89■■□□□ 1.1
SMARCA5O60264 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMARCA5O60264 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.89■■□□□ 1.1
SMARCA5O60264 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 DRAXINP1-201ENST00000437611 948 ntBASIC21.89■■□□□ 1.09
SMARCA5O60264 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SMARCA5O60264 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCA5O60264 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCA5O60264 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SMARCA5O60264 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCA5O60264 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCA5O60264 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCA5O60264 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCA5O60264 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.88■■□□□ 1.09
SMARCA5O60264 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SMARCA5O60264 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
SMARCA5O60264 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.88■■□□□ 1.09
SMARCA5O60264 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMARCA5O60264 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.88■■□□□ 1.09
SMARCA5O60264 UPK3BP1-201ENST00000428678 509 ntBASIC21.88■■□□□ 1.09
SMARCA5O60264 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCA5O60264 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.88■■□□□ 1.09
SMARCA5O60264 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms