Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 LINC00304-203ENST00000565008 1864 ntBASIC15.84■□□□□ 0.13
TRAF3IP2O43734 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 REXO1L11P-201ENST00000620964 1927 ntBASIC15.84■□□□□ 0.13
TRAF3IP2O43734 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP2O43734 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 AP002383.4-201ENST00000442518 975 ntBASIC15.83■□□□□ 0.12
TRAF3IP2O43734 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 AC005336.2-201ENST00000593183 939 ntBASIC15.83■□□□□ 0.12
TRAF3IP2O43734 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP2O43734 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC246785.2-201ENST00000432512 513 ntBASIC15.82■□□□□ 0.12
TRAF3IP2O43734 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC091076.1-201ENST00000610741 619 ntBASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC097374.2-201ENST00000618617 1306 ntBASIC15.82■□□□□ 0.12
TRAF3IP2O43734 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 BX276092.7-203ENST00000637198 1536 ntBASIC15.82■□□□□ 0.12
TRAF3IP2O43734 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 AC133963.1-201ENST00000504166 1679 ntBASIC15.82■□□□□ 0.12
TRAF3IP2O43734 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP2O43734 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAF3IP2O43734 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms