Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC7A4O43246 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.06■□□□□ 0.48
SLC7A4O43246 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC7A4O43246 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC7A4O43246 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC7A4O43246 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.06■□□□□ 0.48
SLC7A4O43246 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC7A4O43246 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC7A4O43246 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC7A4O43246 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SLC7A4O43246 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SLC7A4O43246 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC7A4O43246 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC7A4O43246 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC7A4O43246 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 AC006116.8-202ENST00000587620 1550 ntBASIC18.05■□□□□ 0.48
SLC7A4O43246 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 AC009078.2-202ENST00000463353 338 ntBASIC18.05■□□□□ 0.48
SLC7A4O43246 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC7A4O43246 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC7A4O43246 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC7A4O43246 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC7A4O43246 AL138831.2-201ENST00000606564 490 ntBASIC18.05■□□□□ 0.48
SLC7A4O43246 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SLC7A4O43246 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC7A4O43246 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC7A4O43246 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC7A4O43246 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
SLC7A4O43246 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC7A4O43246 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC7A4O43246 AC022898.2-201ENST00000616822 1312 ntBASIC18.04■□□□□ 0.48
SLC7A4O43246 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC7A4O43246 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC7A4O43246 TP73-AS1-210ENST00000637775 1455 ntBASIC18.04■□□□□ 0.48
SLC7A4O43246 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SLC7A4O43246 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC7A4O43246 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC7A4O43246 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC7A4O43246 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.04■□□□□ 0.48
SLC7A4O43246 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC7A4O43246 AC064862.7-201ENST00000604520 867 ntBASIC18.04■□□□□ 0.48
SLC7A4O43246 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SLC7A4O43246 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC7A4O43246 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC7A4O43246 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC7A4O43246 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC7A4O43246 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC7A4O43246 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC7A4O43246 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SLC7A4O43246 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC7A4O43246 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms