Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCRL2O00421 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCRL2O00421 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.02■□□□□ 0.15
CCRL2O00421 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCRL2O00421 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CCRL2O00421 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.02■□□□□ 0.15
CCRL2O00421 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
CCRL2O00421 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 POM121L13P-201ENST00000422362 380 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 AC004980.1-204ENST00000429707 299 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 MCCD1P1-208ENST00000445732 328 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 DUTP2-201ENST00000519164 463 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 UNC93B5-201ENST00000530315 699 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 KRT18P6-201ENST00000555540 1265 ntBASIC16.01■□□□□ 0.15
CCRL2O00421 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCRL2O00421 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCRL2O00421 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCRL2O00421 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
CCRL2O00421 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
CCRL2O00421 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16■□□□□ 0.15
CCRL2O00421 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 AC100803.2-201ENST00000562459 1963 ntBASIC16■□□□□ 0.15
CCRL2O00421 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16■□□□□ 0.15
CCRL2O00421 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCRL2O00421 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCRL2O00421 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CCRL2O00421 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCRL2O00421 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCRL2O00421 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCRL2O00421 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCRL2O00421 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms