Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 CD72-202ENST00000378430 585 ntTSL 3 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 AC006455.2-201ENST00000429931 906 ntBASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC25A6P5-201ENST00000435663 894 ntBASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 AC010525.1-201ENST00000585559 441 ntBASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 AC105917.1-201ENST00000506637 2539 ntBASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 AP005435.1-201ENST00000529293 1178 ntBASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 DUX4L18-201ENST00000553347 1267 ntBASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 AL009178.2-201ENST00000597278 2719 ntBASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 PXK-203ENST00000383715 1756 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC9A7P1-201ENST00000554295 3311 ntBASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.85□□□□□ -0.83
CHKB-CPT1BH3BT56 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CHKB-CPT1BH3BT56 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms