Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 FLJ38576-201ENST00000623820 2459 ntBASIC12.66□□□□□ -0.38
LINC01549A6NIU2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 AC097658.1-201ENST00000475555 843 ntBASIC12.66□□□□□ -0.38
LINC01549A6NIU2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 CKBP1-201ENST00000565489 1086 ntBASIC12.66□□□□□ -0.38
LINC01549A6NIU2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01549A6NIU2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 LINC00554-201ENST00000564841 3011 ntBASIC12.65□□□□□ -0.38
LINC01549A6NIU2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.65□□□□□ -0.38
LINC01549A6NIU2 UNC93B4-201ENST00000505679 747 ntBASIC12.65□□□□□ -0.38
LINC01549A6NIU2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.65□□□□□ -0.38
LINC01549A6NIU2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 PCDHA1-201ENST00000378133 2726 ntBASIC12.65□□□□□ -0.38
LINC01549A6NIU2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01549A6NIU2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms