Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 HCG11-201ENST00000411553 5696 ntBASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49BA6NDI0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 RCN1P1-201ENST00000400413 996 ntBASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 AC068472.1-201ENST00000474589 881 ntBASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 AL390719.2-201ENST00000606993 987 ntBASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRIM49BA6NDI0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 MTCL1P1-201ENST00000446207 792 ntBASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 AC092647.4-201ENST00000457211 535 ntBASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 AC063952.2-201ENST00000498792 1227 ntBASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 Z83836.1-201ENST00000624605 1642 ntBASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49BA6NDI0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 LINC01451-201ENST00000623792 534 ntBASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49BA6NDI0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms