Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 EGLN1P1-201ENST00000531623 762 ntBASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC104390.1-201ENST00000555663 520 ntBASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 MIR4497-201ENST00000583208 89 ntBASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 AP001094.4-201ENST00000579008 2176 ntBASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 INGX-201ENST00000359239 846 ntBASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF103-CHMP3A0A140T963 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF103-CHMP3A0A140T963 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RNF103-CHMP3A0A140T963 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
RNF103-CHMP3A0A140T963 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 CYP2D8P-201ENST00000433633 1490 ntBASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 TSPY15P-201ENST00000457163 923 ntBASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC128688.1-201ENST00000487626 519 ntBASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 MIR3180-4-201ENST00000582223 153 ntBASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF103-CHMP3A0A140T963 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms