Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CLCA3PQ9Y6N3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCA3PQ9Y6N3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 NPAP1P7-201ENST00000613027 823 ntBASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 AC022898.2-201ENST00000616822 1312 ntBASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 AC132938.6-201ENST00000623828 1655 ntBASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCA3PQ9Y6N3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 DRAXINP1-201ENST00000437611 948 ntBASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 AP002383.4-201ENST00000442518 975 ntBASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 RN7SL606P-201ENST00000472779 293 ntBASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCA3PQ9Y6N3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 ABALON-201ENST00000629058 1903 ntBASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 AC068472.1-201ENST00000474589 881 ntBASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLCA3PQ9Y6N3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms