Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 AC139530.3-201ENST00000620344 690 ntBASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC079776.2-201ENST00000641154 1609 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 LAGE3P1-201ENST00000425356 484 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC105339.3-201ENST00000560043 636 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC027601.4-201ENST00000611259 610 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC073592.4-201ENST00000623827 446 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 AC073592.3-201ENST00000625118 1834 ntBASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CSNK1G3Q9Y6M4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AC098831.1-202ENST00000438821 336 ntBASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AL591424.1-201ENST00000442569 1213 ntBASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 PRYP5-201ENST00000451909 266 ntBASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AC092910.1-201ENST00000482027 1129 ntBASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM197Y3-203ENST00000618346 717 ntBASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AD001527.2-201ENST00000622994 785 ntBASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1G3Q9Y6M4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms