Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AC068472.1-201ENST00000474589 881 ntBASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SPDYE13P-201ENST00000445314 798 ntBASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 MTCL1P1-201ENST00000446207 792 ntBASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 RNF126P1-202ENST00000569893 925 ntBASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 RN7SL850P-201ENST00000579959 291 ntBASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 AL390719.2-201ENST00000606993 987 ntBASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP46A1Q9Y6A2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 RCN1P1-201ENST00000400413 996 ntBASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 AC022616.7-201ENST00000525383 220 ntBASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 AC083849.1-201ENST00000615227 514 ntBASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CYP46A1Q9Y6A2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 AL023806.1-201ENST00000603994 1649 ntBASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 Z83836.1-201ENST00000624605 1642 ntBASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CYP46A1Q9Y6A2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CYP46A1Q9Y6A2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CYP46A1Q9Y6A2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CYP46A1Q9Y6A2 SIRPAP1-201ENST00000448467 1770 ntBASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms