Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 AC074386.1-202ENST00000463561 864 ntBASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 ACTL9-202ENST00000612068 1252 ntBASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 AC105339.1-204ENST00000636249 355 ntBASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 EFTUD1P1-204ENST00000560401 1798 ntBASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 AC093520.2-201ENST00000561830 333 ntBASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC26.61■■□□□ 1.85
CDC42BPBQ9Y5S2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42BPBQ9Y5S2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 COX20P2-201ENST00000452636 358 ntBASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42BPBQ9Y5S2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 PAWRP1-201ENST00000451083 565 ntBASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CDC42BPBQ9Y5S2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 AL627223.1-201ENST00000416693 442 ntBASIC26.57■■□□□ 1.84
CDC42BPBQ9Y5S2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms