Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SDHAP2-201ENST00000455183 2001 ntBASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 AC079602.3-201ENST00000623931 403 ntBASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 AC068880.1-201ENST00000507289 2297 ntBASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 AC103702.1-201ENST00000548801 2630 ntBASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA4Q9Y5G9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 AC099343.3-201ENST00000605834 2503 ntBASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 TSPY22P-201ENST00000427496 604 ntBASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 HLA-F-220ENST00000434407 884 ntBASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 AL121772.3-201ENST00000610840 674 ntBASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA4Q9Y5G9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA4Q9Y5G9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGA4Q9Y5G9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA4Q9Y5G9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA4Q9Y5G9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms