Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AL390719.2-201ENST00000606993 987 ntBASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AL353801.3-201ENST00000609898 542 ntBASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AC009154.2-201ENST00000621177 724 ntBASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB1Q9Y5F3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AL662844.1-201ENST00000546340 181 ntBASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 GPR32P1-201ENST00000601788 811 ntBASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 AC120114.3-201ENST00000611923 658 ntBASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB1Q9Y5F3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC233702.3-201ENST00000578656 1387 ntBASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 TSPY12P-201ENST00000421279 868 ntBASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC116407.2-201ENST00000613639 860 ntBASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC134043.2-201ENST00000624206 2238 ntBASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 AC006116.8-202ENST00000587620 1550 ntBASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB1Q9Y5F3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms