Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SLC25A6P5-201ENST00000435663 894 ntBASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 KRT18P65-201ENST00000439811 1286 ntBASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 KRT16P4-201ENST00000453883 522 ntBASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AC011840.4-201ENST00000578471 627 ntBASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SLC25A6P4-201ENST00000586535 553 ntBASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 AC006538.3-201ENST00000612495 578 ntBASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHB11Q9Y5F2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 AC132938.6-201ENST00000623828 1655 ntBASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 MINOS1P3-201ENST00000457048 203 ntBASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 AC009154.2-201ENST00000621177 724 ntBASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB11Q9Y5F2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 HTR7P1-202ENST00000624664 4411 ntBASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 RN7SL606P-201ENST00000472779 293 ntBASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms