Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 AL662844.1-201ENST00000546340 181 ntBASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
FNDC3AQ9Y2H6 AL096828.2-201ENST00000567259 1965 ntBASIC18.21■□□□□ 0.5
FNDC3AQ9Y2H6 CROCCP1-201ENST00000426910 5675 ntBASIC18.21■□□□□ 0.5
FNDC3AQ9Y2H6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 OR6D1P-203ENST00000641209 4860 ntBASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 Z69720.1-201ENST00000601483 472 ntBASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.2■□□□□ 0.5
FNDC3AQ9Y2H6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 ABALON-201ENST00000629058 1903 ntBASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 TSPY12P-201ENST00000421279 868 ntBASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC3AQ9Y2H6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 AKR1C7P-201ENST00000305623 895 ntBASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 GPR32P1-201ENST00000601788 811 ntBASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 AC024563.2-201ENST00000603282 481 ntBASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 AL592071.1-201ENST00000611956 408 ntBASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
FNDC3AQ9Y2H6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms