Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 REXO1L11P-201ENST00000620964 1927 ntBASIC20.9■□□□□ 0.94
SMC3Q9UQE7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 KRT18P65-201ENST00000439811 1286 ntBASIC20.9■□□□□ 0.94
SMC3Q9UQE7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 AL138966.2-201ENST00000621997 464 ntBASIC20.9■□□□□ 0.94
SMC3Q9UQE7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMC3Q9UQE7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.89■□□□□ 0.94
SMC3Q9UQE7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 LINC01451-201ENST00000623792 534 ntBASIC20.89■□□□□ 0.93
SMC3Q9UQE7 AL023973.1-201ENST00000624619 620 ntBASIC20.89■□□□□ 0.93
SMC3Q9UQE7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMC3Q9UQE7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 KRT89P-201ENST00000620027 1478 ntBASIC20.88■□□□□ 0.93
SMC3Q9UQE7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 KRT8P47-201ENST00000604727 1398 ntBASIC20.88■□□□□ 0.93
SMC3Q9UQE7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms