Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 AC107956.1-201ENST00000494359 873 ntBASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CD99P1-205ENST00000527459 561 ntBASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 AC009949.1-201ENST00000623048 1830 ntBASIC16.66■□□□□ 0.26
SAMD4AQ9UPU9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 KRT18P29-201ENST00000397031 1267 ntBASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 AC012618.2-201ENST00000428058 849 ntBASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 MIR4651-201ENST00000582622 73 ntBASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 AC113410.3-201ENST00000623366 203 ntBASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 TNRC18P3-201ENST00000441896 2691 ntBASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.65■□□□□ 0.26
SAMD4AQ9UPU9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SAMD4AQ9UPU9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.64■□□□□ 0.26
SAMD4AQ9UPU9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.64■□□□□ 0.26
SAMD4AQ9UPU9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.64■□□□□ 0.26
SAMD4AQ9UPU9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 AC116562.4-202ENST00000641738 218 ntBASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SAMD4AQ9UPU9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms