Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDZRN3Q9UPQ7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 ZNF259P1-201ENST00000407656 1365 ntBASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 SDHAP2-201ENST00000455183 2001 ntBASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 RPS2P28-201ENST00000314255 741 ntBASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 SCARNA2-201ENST00000458748 420 ntBASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDZRN3Q9UPQ7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AC243591.1-201ENST00000452967 1364 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 GMCL1P1-201ENST00000463439 1581 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 RBM17P3-201ENST00000417687 1192 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 BX842568.4-201ENST00000421222 227 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AC073648.2-201ENST00000510116 352 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AC008687.5-201ENST00000593746 558 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AL355877.3-201ENST00000622820 899 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 AC148477.8-201ENST00000624298 468 ntBASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.9■■□□□ 1.26
PDZRN3Q9UPQ7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDZRN3Q9UPQ7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 AC132008.2-207ENST00000454517 770 ntBASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 RPL13AP23-201ENST00000480739 586 ntBASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms