Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 AC073648.2-201ENST00000510116 352 ntBASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 AP000867.4-201ENST00000641616 219 ntBASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CPNE7Q9UBL6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 FZD10-202ENST00000539839 3282 ntBASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 AC103564.2-201ENST00000432853 1299 ntBASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 RNPS1P1-201ENST00000507437 918 ntBASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 AP001005.1-201ENST00000571755 1248 ntBASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 AC148477.8-201ENST00000624298 468 ntBASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE7Q9UBL6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE7Q9UBL6 FLJ13224-201ENST00000313737 1514 ntBASIC17.21■□□□□ 0.34
CPNE7Q9UBL6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CPNE7Q9UBL6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
CPNE7Q9UBL6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPNE7Q9UBL6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 AC009949.1-201ENST00000623048 1830 ntBASIC17.2■□□□□ 0.34
CPNE7Q9UBL6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms