Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 ELK2BP-201ENST00000415014 1224 ntBASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AC006557.2-201ENST00000592985 1240 ntBASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AC090164.3-201ENST00000610780 2143 ntBASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
FBXO28Q9NVF7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 KLF4P1-201ENST00000412782 1185 ntBASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 AL591424.1-201ENST00000442569 1213 ntBASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 AC006504.4-201ENST00000592118 1568 ntBASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FBXO28Q9NVF7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 AC136632.2-201ENST00000512891 861 ntBASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 MIR1199-201ENST00000621445 119 ntBASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 AC055717.3-201ENST00000622967 595 ntBASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.35■□□□□ 0.85
FBXO28Q9NVF7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 AL589182.2-201ENST00000619332 1049 ntBASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 AC004706.3-202ENST00000621574 984 ntBASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 AC005593.1-201ENST00000624894 515 ntBASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms